Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MMP2P08253 KRT8P37-201ENST00000451609 1420 ntBASIC16.22■□□□□ 0.19
MMP2P08253 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
MMP2P08253 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 SPDYE17-201ENST00000412399 783 ntBASIC16.22■□□□□ 0.19
MMP2P08253 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
MMP2P08253 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP2P08253 METTL21AP1-201ENST00000438852 635 ntBASIC16.22■□□□□ 0.19
MMP2P08253 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.22■□□□□ 0.19
MMP2P08253 AC004449.1-201ENST00000564240 433 ntBASIC16.22■□□□□ 0.19
MMP2P08253 AC051619.7-201ENST00000568314 623 ntBASIC16.22■□□□□ 0.19
MMP2P08253 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP2P08253 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP2P08253 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP2P08253 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP2P08253 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
MMP2P08253 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP2P08253 AL035456.1-201ENST00000456064 1369 ntBASIC16.22■□□□□ 0.19
MMP2P08253 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP2P08253 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP2P08253 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP2P08253 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MMP2P08253 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP2P08253 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP2P08253 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MMP2P08253 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP2P08253 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MMP2P08253 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.21■□□□□ 0.19
MMP2P08253 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MMP2P08253 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP2P08253 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP2P08253 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
MMP2P08253 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MMP2P08253 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MMP2P08253 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.21■□□□□ 0.19
MMP2P08253 MTND6P24-201ENST00000440466 518 ntBASIC16.21■□□□□ 0.19
MMP2P08253 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.21■□□□□ 0.19
MMP2P08253 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 AC025678.2-201ENST00000562061 970 ntBASIC16.21■□□□□ 0.19
MMP2P08253 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.21■□□□□ 0.19
MMP2P08253 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.21■□□□□ 0.19
MMP2P08253 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP2P08253 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP2P08253 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP2P08253 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP2P08253 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP2P08253 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MMP2P08253 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP2P08253 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MMP2P08253 TUBB3P1-201ENST00000405796 1332 ntBASIC16.2■□□□□ 0.18
MMP2P08253 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 PAUPAR-201ENST00000630360 2965 ntBASIC16.2■□□□□ 0.18
MMP2P08253 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.2■□□□□ 0.18
MMP2P08253 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.2■□□□□ 0.18
MMP2P08253 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP2P08253 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP2P08253 HIST3H2BA-201ENST00000436555 524 ntBASIC16.2■□□□□ 0.18
MMP2P08253 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 CNN2P2-201ENST00000443536 909 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms