Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 OR2I1P-209ENST00000641730 5365 ntBASIC14.72□□□□□ -0.05
HMGN1P05114 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGN1P05114 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGN1P05114 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGN1P05114 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HMGN1P05114 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HMGN1P05114 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGN1P05114 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGN1P05114 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGN1P05114 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HMGN1P05114 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGN1P05114 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGN1P05114 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGN1P05114 FAM185BP-201ENST00000443595 716 ntBASIC14.71□□□□□ -0.05
HMGN1P05114 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGN1P05114 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGN1P05114 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGN1P05114 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGN1P05114 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGN1P05114 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGN1P05114 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
HMGN1P05114 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGN1P05114 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGN1P05114 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGN1P05114 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGN1P05114 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGN1P05114 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGN1P05114 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGN1P05114 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGN1P05114 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGN1P05114 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGN1P05114 SSR4P1-203ENST00000599569 2260 ntBASIC14.71□□□□□ -0.06
HMGN1P05114 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 AC023157.3-201ENST00000619086 2088 ntBASIC14.7□□□□□ -0.06
HMGN1P05114 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGN1P05114 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGN1P05114 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.7□□□□□ -0.06
HMGN1P05114 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGN1P05114 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.7□□□□□ -0.06
HMGN1P05114 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGN1P05114 AL031055.1-201ENST00000606362 631 ntBASIC14.7□□□□□ -0.06
HMGN1P05114 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGN1P05114 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGN1P05114 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HMGN1P05114 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGN1P05114 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGN1P05114 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGN1P05114 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.69□□□□□ -0.06
HMGN1P05114 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
HMGN1P05114 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HMGN1P05114 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HMGN1P05114 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGN1P05114 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGN1P05114 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGN1P05114 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGN1P05114 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms