Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CD74P04233 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 AP002383.4-201ENST00000442518 975 ntBASIC13.64□□□□□ -0.23
CD74P04233 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.64□□□□□ -0.23
CD74P04233 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.64□□□□□ -0.23
CD74P04233 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 AC004706.3-202ENST00000621574 984 ntBASIC13.64□□□□□ -0.23
CD74P04233 AL139288.1-201ENST00000623748 933 ntBASIC13.64□□□□□ -0.23
CD74P04233 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CD74P04233 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD74P04233 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CD74P04233 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 AC074051.2-201ENST00000565115 352 ntBASIC13.63□□□□□ -0.23
CD74P04233 AC139887.3-201ENST00000568585 713 ntBASIC13.63□□□□□ -0.23
CD74P04233 NKAPP1-205ENST00000585790 367 ntBASIC13.63□□□□□ -0.23
CD74P04233 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 AP001269.4-201ENST00000609611 512 ntBASIC13.63□□□□□ -0.23
CD74P04233 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 AL805961.1-202ENST00000641562 540 ntBASIC13.63□□□□□ -0.23
CD74P04233 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD74P04233 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD74P04233 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 AC129492.6-201ENST00000611383 1305 ntBASIC13.63□□□□□ -0.23
CD74P04233 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD74P04233 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.62□□□□□ -0.23
CD74P04233 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.62□□□□□ -0.23
CD74P04233 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CD74P04233 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.62□□□□□ -0.23
CD74P04233 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CD74P04233 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD74P04233 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CD74P04233 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.62□□□□□ -0.23
CD74P04233 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD74P04233 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD74P04233 KRT8P44-201ENST00000441609 1350 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms