Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
TRGV3P03979 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.79□□□□□ -0.36
TRGV3P03979 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV3P03979 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.79□□□□□ -0.36
TRGV3P03979 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV3P03979 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.79□□□□□ -0.36
TRGV3P03979 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TRGV3P03979 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 AC004461.1-201ENST00000412461 403 ntBASIC12.78□□□□□ -0.36
TRGV3P03979 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 CNN2P11-201ENST00000429351 262 ntBASIC12.78□□□□□ -0.36
TRGV3P03979 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV3P03979 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.78□□□□□ -0.36
TRGV3P03979 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV3P03979 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV3P03979 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TRGV3P03979 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV3P03979 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 REXO1L8P-201ENST00000604378 1897 ntBASIC12.78□□□□□ -0.36
TRGV3P03979 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV3P03979 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV3P03979 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRGV3P03979 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.77□□□□□ -0.36
TRGV3P03979 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TRGV3P03979 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV3P03979 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 AP006288.1-201ENST00000446065 395 ntBASIC12.77□□□□□ -0.37
TRGV3P03979 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.77□□□□□ -0.37
TRGV3P03979 DNAJB3-202ENST00000449667 1266 ntBASIC12.77□□□□□ -0.37
TRGV3P03979 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV3P03979 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV3P03979 AC069335.1-201ENST00000489972 472 ntBASIC12.77□□□□□ -0.37
TRGV3P03979 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.77□□□□□ -0.37
TRGV3P03979 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV3P03979 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV3P03979 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.77□□□□□ -0.37
TRGV3P03979 AP000842.3-202ENST00000569238 1080 ntBASIC12.77□□□□□ -0.37
TRGV3P03979 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.77□□□□□ -0.37
TRGV3P03979 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRGV3P03979 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms