Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 AC015818.8-201ENST00000587907 1519 ntBASIC16.05■□□□□ 0.16
PDGFBP01127 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 AC026471.1-201ENST00000564629 3026 ntBASIC16.05■□□□□ 0.16
PDGFBP01127 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PDGFBP01127 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.05■□□□□ 0.16
PDGFBP01127 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.05■□□□□ 0.16
PDGFBP01127 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.05■□□□□ 0.16
PDGFBP01127 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.05■□□□□ 0.16
PDGFBP01127 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.05■□□□□ 0.16
PDGFBP01127 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.05■□□□□ 0.16
PDGFBP01127 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.05■□□□□ 0.16
PDGFBP01127 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 HTR7P1-202ENST00000624664 4411 ntBASIC16.05■□□□□ 0.16
PDGFBP01127 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFBP01127 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDGFBP01127 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFBP01127 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PDGFBP01127 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 EEF1DP4-201ENST00000446006 880 ntBASIC16.04■□□□□ 0.16
PDGFBP01127 RN7SL720P-201ENST00000488178 304 ntBASIC16.04■□□□□ 0.16
PDGFBP01127 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFBP01127 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFBP01127 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFBP01127 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFBP01127 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFBP01127 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
PDGFBP01127 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDGFBP01127 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.04■□□□□ 0.16
PDGFBP01127 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 CROCCP2-202ENST00000412962 2773 ntBASIC16.04■□□□□ 0.16
PDGFBP01127 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PDGFBP01127 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFBP01127 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFBP01127 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms