Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AC005912.2-201ENST00000619492 2400 ntBASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AC009947.2-201ENST00000444014 672 ntBASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AL353593.2-201ENST00000602529 1483 ntBASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
TMEM256-PLSCR3K7ERE1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.27□□□□□ -0.77
TMEM256-PLSCR3K7ERE1 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms