Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 RNPS1P1-201ENST00000507437 918 ntBASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 TP73-AS1-207ENST00000624167 988 ntBASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC087641.1-201ENST00000557561 1021 ntBASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC005412.3-201ENST00000580309 715 ntBASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC008667.4-201ENST00000607370 168 ntBASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC008735.5-201ENST00000623544 497 ntBASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AP001350.2-201ENST00000625104 1094 ntBASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC129492.6-201ENST00000611383 1305 ntBASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF103-CHMP3A0A140T963 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms