Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 AL035685.1-201ENST00000636663 812 ntBASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 HLA-A-209ENST00000638375 975 ntBASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 BX324167.2-201ENST00000623717 3316 ntBASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 GPR89P-201ENST00000407924 1495 ntBASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 PC-204ENST00000524491 1714 ntTSL 2 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
LINC01558Q9Y6Z2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 ZBED1P1-201ENST00000502364 1930 ntBASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 AC002558.1-201ENST00000488906 803 ntBASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CYP2T3P-201ENST00000601990 817 ntBASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 MIR4787-201ENST00000607364 84 ntBASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 AC134407.2-201ENST00000625089 1978 ntBASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 SON-203ENST00000381679 7860 ntTSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms