Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 LINC02228-204ENST00000642115 2962 ntBASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 AP002472.1-201ENST00000577490 586 ntBASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 AL513190.1-201ENST00000621254 727 ntBASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGA11Q9Y5H2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 AL603832.2-201ENST00000566195 2125 ntBASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGA11Q9Y5H2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGA11Q9Y5H2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 AL365330.1-201ENST00000607459 531 ntBASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 AC092865.6-201ENST00000642101 219 ntBASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms