Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AC084121.4-201ENST00000641598 221 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 AF228730.8-201ENST00000642140 221 ntBASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB6Q9Y5F9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 HLA-J-202ENST00000469281 1241 ntBASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 AC093520.2-201ENST00000561830 333 ntBASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB6Q9Y5F9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC005237.2-201ENST00000434368 219 ntBASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC109322.1-201ENST00000524499 1264 ntBASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC087641.1-201ENST00000557561 1021 ntBASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC011467.4-201ENST00000594891 528 ntBASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC106028.4-201ENST00000614509 607 ntBASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms