Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGC4Q9Y5F7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 KLF2P3-201ENST00000451977 1087 ntBASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 AC015911.4-201ENST00000588022 1070 ntBASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGC4Q9Y5F7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 AL136982.4-201ENST00000437689 1740 ntBASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 MTND6P24-201ENST00000440466 518 ntBASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 AC245100.5-201ENST00000452108 331 ntBASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 AC125807.1-201ENST00000483097 614 ntBASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 RFPL4AP1-201ENST00000530883 850 ntBASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 AC051619.7-201ENST00000568314 623 ntBASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 RN7SL828P-201ENST00000607615 303 ntBASIC16.32■□□□□ 0.2
PCDHGC4Q9Y5F7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 AL391005.1-201ENST00000623953 2435 ntBASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGC4Q9Y5F7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms