Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTDP1Q9Y5B0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTDP1Q9Y5B0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 DFFBP1-201ENST00000433250 979 ntBASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 TP53TG3HP-202ENST00000569755 579 ntBASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 AC078925.2-201ENST00000624013 1973 ntBASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTDP1Q9Y5B0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms