Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 EEF1DP4-201ENST00000446006 880 ntBASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 EIF4HP1-201ENST00000453115 687 ntBASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H4Q9UPT8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 AC005252.2-201ENST00000624630 1141 ntBASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H4Q9UPT8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZC3H4Q9UPT8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZC3H4Q9UPT8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZC3H4Q9UPT8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZC3H4Q9UPT8 PP12613-201ENST00000424958 2230 ntBASIC19.39■□□□□ 0.7
ZC3H4Q9UPT8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 TOMM22P5-201ENST00000416399 439 ntBASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AC022137.2-201ENST00000503482 481 ntBASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 AL136982.4-201ENST00000437689 1740 ntBASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
ZC3H4Q9UPT8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.38■□□□□ 0.69
ZC3H4Q9UPT8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms