Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 AC073592.8-201ENST00000624126 511 ntBASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 KRT8P39-201ENST00000396270 1433 ntBASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 AL671710.1-201ENST00000610245 2349 ntBASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA1Q9UND3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AC073389.1-201ENST00000595595 795 ntBASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AC008761.3-201ENST00000624803 892 ntBASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AF228730.6-201ENST00000641497 218 ntBASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AC084121.3-201ENST00000641716 218 ntBASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AC105233.6-201ENST00000642093 218 ntBASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA1Q9UND3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPA1Q9UND3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 FAM207CP-201ENST00000443486 507 ntBASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NPIPA1Q9UND3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms