Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 DKFZP434H168-201ENST00000567381 1905 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC092053.3-201ENST00000641308 4975 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LCE3DQ9BYE3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 AL109954.1-202ENST00000564051 2148 ntBASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LCE3DQ9BYE3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms