Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 DBET-201ENST00000630918 3363 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 UNC93B7-201ENST00000509439 705 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC109635.5-201ENST00000533593 962 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 FAM215A-202ENST00000632077 792 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC020658.6-201ENST00000623564 1870 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC011477.6-201ENST00000604980 1927 ntBASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SHANK2-AS3Q9BTD1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC006058.4-201ENST00000624016 1670 ntBASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 VN2R19P-201ENST00000442399 1052 ntBASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SHANK2-AS3Q9BTD1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms