Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 FAM185BP-201ENST00000443595 716 ntBASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 AC021097.1-201ENST00000607902 574 ntBASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.72□□□□□ -0.21
HDHD3Q9BSH5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 AC018712.1-201ENST00000455767 687 ntBASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 AC148477.8-201ENST00000624298 468 ntBASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 AC117500.6-201ENST00000624871 588 ntBASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HDHD3Q9BSH5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HDHD3Q9BSH5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HDHD3Q9BSH5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms