Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 AP002414.3-201ENST00000589352 1468 ntBASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS1Q8NFJ9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AL136379.1-201ENST00000623471 2642 ntBASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AC126755.1-201ENST00000525846 6405 ntBASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AC108073.2-201ENST00000464002 357 ntBASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AL356488.2-201ENST00000602755 427 ntBASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AC020658.6-201ENST00000623564 1870 ntBASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AC004790.2-201ENST00000623588 572 ntBASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 AC023157.3-201ENST00000619086 2088 ntBASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS1Q8NFJ9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 MRPL20P1-201ENST00000400819 433 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 HMGA1P7-201ENST00000406908 502 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 AC012640.2-201ENST00000561606 901 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 MIR4515-201ENST00000584082 81 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 AL031055.1-201ENST00000606362 631 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 MIR1199-201ENST00000621445 119 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 AC008735.5-201ENST00000623544 497 ntBASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.61□□□□□ -0.07
BBS1Q8NFJ9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms