Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 DNAJB3-202ENST00000449667 1266 ntBASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 AC018635.1-201ENST00000468292 1030 ntBASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 AC115989.2-201ENST00000578640 563 ntBASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
EFCAB3Q8N7B9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AC019070.1-201ENST00000415008 1024 ntBASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AC007967.2-201ENST00000432613 625 ntBASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 PRYP5-201ENST00000451909 266 ntBASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AC023968.2-201ENST00000560593 1049 ntBASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AC020910.4-201ENST00000612269 540 ntBASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
EFCAB3Q8N7B9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 MTND3P3-201ENST00000505004 126 ntBASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 UNC93B6-202ENST00000528242 690 ntBASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 SNHG9-202ENST00000564014 471 ntBASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFCAB3Q8N7B9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms