Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.81■□□□□ 0.28
CCDC25Q86WR0 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 AC136621.1-201ENST00000624017 2304 ntBASIC16.81■□□□□ 0.28
CCDC25Q86WR0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 AC016027.1-202ENST00000607927 1699 ntBASIC16.81■□□□□ 0.28
CCDC25Q86WR0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC25Q86WR0 AL592424.1-201ENST00000563624 1536 ntBASIC16.8■□□□□ 0.28
CCDC25Q86WR0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 AL358472.4-201ENST00000633140 710 ntBASIC16.8■□□□□ 0.28
CCDC25Q86WR0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 AL805961.1-202ENST00000641562 540 ntBASIC16.8■□□□□ 0.28
CCDC25Q86WR0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC25Q86WR0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 ATP5G2P1-201ENST00000433580 426 ntBASIC16.79■□□□□ 0.28
CCDC25Q86WR0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC25Q86WR0 AC005412.3-201ENST00000580309 715 ntBASIC16.79■□□□□ 0.28
CCDC25Q86WR0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms