Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX4P78413 MIR943-201ENST00000401286 94 ntBASIC16.95■□□□□ 0.3
IRX4P78413 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.95■□□□□ 0.3
IRX4P78413 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
IRX4P78413 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.95■□□□□ 0.3
IRX4P78413 AC051619.7-201ENST00000568314 623 ntBASIC16.95■□□□□ 0.3
IRX4P78413 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.95■□□□□ 0.3
IRX4P78413 AC099522.2-201ENST00000607001 744 ntBASIC16.95■□□□□ 0.3
IRX4P78413 AC012645.4-201ENST00000610691 1061 ntBASIC16.95■□□□□ 0.3
IRX4P78413 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX4P78413 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.95■□□□□ 0.3
IRX4P78413 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX4P78413 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX4P78413 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX4P78413 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.95■□□□□ 0.3
IRX4P78413 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IRX4P78413 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX4P78413 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 AC022188.1-201ENST00000620960 1664 ntBASIC16.94■□□□□ 0.3
IRX4P78413 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
IRX4P78413 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX4P78413 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
IRX4P78413 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX4P78413 MIR661-201ENST00000384842 89 ntBASIC16.94■□□□□ 0.3
IRX4P78413 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.94■□□□□ 0.3
IRX4P78413 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX4P78413 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 AC005225.4-201ENST00000557330 545 ntBASIC16.94■□□□□ 0.3
IRX4P78413 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.94■□□□□ 0.3
IRX4P78413 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
IRX4P78413 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 TUBB3P1-201ENST00000405796 1332 ntBASIC16.94■□□□□ 0.3
IRX4P78413 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.94■□□□□ 0.3
IRX4P78413 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IRX4P78413 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.93■□□□□ 0.3
IRX4P78413 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
IRX4P78413 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
IRX4P78413 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX4P78413 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.93■□□□□ 0.3
IRX4P78413 TFAMP1-201ENST00000412727 736 ntBASIC16.93■□□□□ 0.3
IRX4P78413 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.93■□□□□ 0.3
IRX4P78413 FAM58DP-201ENST00000428076 619 ntBASIC16.93■□□□□ 0.3
IRX4P78413 AC079140.1-201ENST00000508039 487 ntBASIC16.93■□□□□ 0.3
IRX4P78413 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
IRX4P78413 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.93■□□□□ 0.3
IRX4P78413 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.93■□□□□ 0.3
IRX4P78413 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.93■□□□□ 0.3
IRX4P78413 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.93■□□□□ 0.3
IRX4P78413 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.93■□□□□ 0.3
IRX4P78413 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
IRX4P78413 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms