Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SPDYE11-202ENST00000450699 704 ntBASIC14.17□□□□□ -0.14
HIST1H3AP68431 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 AC079140.1-201ENST00000508039 487 ntBASIC14.17□□□□□ -0.14
HIST1H3AP68431 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 AP000842.3-202ENST00000569238 1080 ntBASIC14.17□□□□□ -0.14
HIST1H3AP68431 SPDYE9P-201ENST00000570642 692 ntBASIC14.17□□□□□ -0.14
HIST1H3AP68431 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SPDYE10P-202ENST00000612005 668 ntBASIC14.17□□□□□ -0.14
HIST1H3AP68431 SPDYE8P-202ENST00000612377 668 ntBASIC14.17□□□□□ -0.14
HIST1H3AP68431 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.16□□□□□ -0.14
HIST1H3AP68431 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 HTR5BP-201ENST00000430851 1154 ntBASIC14.16□□□□□ -0.14
HIST1H3AP68431 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HIST1H3AP68431 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H3AP68431 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H3AP68431 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H3AP68431 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms