Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.37■□□□□ 0.21
WNT3AP56704 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 AL627223.1-201ENST00000416693 442 ntBASIC16.37■□□□□ 0.21
WNT3AP56704 FAM58DP-201ENST00000428076 619 ntBASIC16.37■□□□□ 0.21
WNT3AP56704 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
WNT3AP56704 AP000344.2-201ENST00000512987 629 ntBASIC16.37■□□□□ 0.21
WNT3AP56704 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.37■□□□□ 0.21
WNT3AP56704 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 AP3S2-216ENST00000617003 1561 ntBASIC16.37■□□□□ 0.21
WNT3AP56704 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
WNT3AP56704 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.37■□□□□ 0.21
WNT3AP56704 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
WNT3AP56704 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
WNT3AP56704 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.36■□□□□ 0.21
WNT3AP56704 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
WNT3AP56704 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
WNT3AP56704 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.36■□□□□ 0.21
WNT3AP56704 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
WNT3AP56704 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.36■□□□□ 0.21
WNT3AP56704 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.36■□□□□ 0.21
WNT3AP56704 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.36■□□□□ 0.21
WNT3AP56704 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
WNT3AP56704 AC004835.2-201ENST00000603762 682 ntBASIC16.36■□□□□ 0.21
WNT3AP56704 AC055717.3-201ENST00000622967 595 ntBASIC16.36■□□□□ 0.21
WNT3AP56704 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.36■□□□□ 0.21
WNT3AP56704 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
WNT3AP56704 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.36■□□□□ 0.21
WNT3AP56704 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.36■□□□□ 0.21
WNT3AP56704 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
WNT3AP56704 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
WNT3AP56704 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.35■□□□□ 0.21
WNT3AP56704 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.35■□□□□ 0.21
WNT3AP56704 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
WNT3AP56704 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.35■□□□□ 0.21
WNT3AP56704 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 KRT18P13-201ENST00000400056 1290 ntBASIC16.35■□□□□ 0.21
WNT3AP56704 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.35■□□□□ 0.21
WNT3AP56704 KRT18P32-201ENST00000424695 1287 ntBASIC16.35■□□□□ 0.21
WNT3AP56704 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.35■□□□□ 0.21
WNT3AP56704 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.35■□□□□ 0.21
WNT3AP56704 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.35■□□□□ 0.21
WNT3AP56704 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.35■□□□□ 0.21
WNT3AP56704 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.35■□□□□ 0.21
WNT3AP56704 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.35■□□□□ 0.21
WNT3AP56704 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.35■□□□□ 0.21
WNT3AP56704 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
WNT3AP56704 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms