Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ4P56696 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.38■□□□□ 0.85
KCNQ4P56696 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNQ4P56696 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ4P56696 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ4P56696 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.38■□□□□ 0.85
KCNQ4P56696 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KCNQ4P56696 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ4P56696 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KCNQ4P56696 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KCNQ4P56696 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KCNQ4P56696 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.37■□□□□ 0.85
KCNQ4P56696 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 AC091046.1-201ENST00000331871 207 ntBASIC20.37■□□□□ 0.85
KCNQ4P56696 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.37■□□□□ 0.85
KCNQ4P56696 CNN2P8-201ENST00000421872 913 ntBASIC20.37■□□□□ 0.85
KCNQ4P56696 EIF4HP1-201ENST00000453115 687 ntBASIC20.37■□□□□ 0.85
KCNQ4P56696 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.37■□□□□ 0.85
KCNQ4P56696 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KCNQ4P56696 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ4P56696 AC005695.3-201ENST00000614522 232 ntBASIC20.37■□□□□ 0.85
KCNQ4P56696 AL008638.5-201ENST00000623814 1298 ntBASIC20.37■□□□□ 0.85
KCNQ4P56696 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.37■□□□□ 0.85
KCNQ4P56696 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.37■□□□□ 0.85
KCNQ4P56696 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KCNQ4P56696 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.36■□□□□ 0.85
KCNQ4P56696 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KCNQ4P56696 PCDHB18P-201ENST00000524813 2368 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
KCNQ4P56696 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ4P56696 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
KCNQ4P56696 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KCNQ4P56696 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ4P56696 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
KCNQ4P56696 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.36■□□□□ 0.85
KCNQ4P56696 FAM197Y7-201ENST00000432892 766 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.36■□□□□ 0.85
KCNQ4P56696 AL591846.1-201ENST00000451736 433 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 HIST2H2BC-201ENST00000498492 580 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 AC078819.1-201ENST00000547454 765 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 AC012085.1-201ENST00000548270 765 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ4P56696 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 MIR6727-201ENST00000620702 65 ntBASIC20.36■□□□□ 0.85
KCNQ4P56696 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.36■□□□□ 0.85
KCNQ4P56696 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.36■□□□□ 0.85
KCNQ4P56696 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KCNQ4P56696 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
KCNQ4P56696 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ4P56696 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
KCNQ4P56696 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ4P56696 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KCNQ4P56696 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ4P56696 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.35■□□□□ 0.85
KCNQ4P56696 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ4P56696 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.35■□□□□ 0.85
KCNQ4P56696 AKR7A2P1-201ENST00000460134 915 ntBASIC20.35■□□□□ 0.85
KCNQ4P56696 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.35■□□□□ 0.85
KCNQ4P56696 AP002490.2-201ENST00000524791 560 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms