Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AP001269.4-201ENST00000609611 512 ntBASIC15.46■□□□□ 0.07
NR1H2P55055 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H2P55055 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NR1H2P55055 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H2P55055 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.46■□□□□ 0.06
NR1H2P55055 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.46■□□□□ 0.06
NR1H2P55055 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 LINC01101-201ENST00000622953 1884 ntBASIC15.46■□□□□ 0.06
NR1H2P55055 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H2P55055 CDC14C-201ENST00000428251 1719 ntBASIC15.46■□□□□ 0.06
NR1H2P55055 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 AC097374.2-201ENST00000618617 1306 ntBASIC15.45■□□□□ 0.06
NR1H2P55055 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
NR1H2P55055 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 AL365209.1-201ENST00000624418 6473 ntBASIC15.45■□□□□ 0.06
NR1H2P55055 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.45■□□□□ 0.06
NR1H2P55055 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 LINC02447-202ENST00000501888 2146 ntBASIC15.45■□□□□ 0.06
NR1H2P55055 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.45■□□□□ 0.06
NR1H2P55055 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 AL139288.1-201ENST00000623748 933 ntBASIC15.45■□□□□ 0.06
NR1H2P55055 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.45■□□□□ 0.06
NR1H2P55055 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 GPR89P-201ENST00000407924 1495 ntBASIC15.45■□□□□ 0.06
NR1H2P55055 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 LINC00528-201ENST00000600723 2160 ntBASIC15.45■□□□□ 0.06
NR1H2P55055 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NR1H2P55055 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.45■□□□□ 0.06
NR1H2P55055 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.45■□□□□ 0.06
NR1H2P55055 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.44■□□□□ 0.06
NR1H2P55055 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NR1H2P55055 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.44■□□□□ 0.06
NR1H2P55055 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.44■□□□□ 0.06
NR1H2P55055 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
NR1H2P55055 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NR1H2P55055 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.44■□□□□ 0.06
NR1H2P55055 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.44■□□□□ 0.06
NR1H2P55055 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.44■□□□□ 0.06
NR1H2P55055 AC139887.3-201ENST00000568585 713 ntBASIC15.44■□□□□ 0.06
NR1H2P55055 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.44■□□□□ 0.06
NR1H2P55055 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
NR1H2P55055 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NR1H2P55055 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.44■□□□□ 0.06
NR1H2P55055 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NR1H2P55055 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms