Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE1AP54750 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.74■□□□□ 0.75
PDE1AP54750 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PDE1AP54750 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDE1AP54750 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE1AP54750 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE1AP54750 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.74■□□□□ 0.75
PDE1AP54750 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE1AP54750 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PDE1AP54750 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.73■□□□□ 0.75
PDE1AP54750 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PDE1AP54750 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE1AP54750 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PDE1AP54750 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PDE1AP54750 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE1AP54750 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PDE1AP54750 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 AC211486.1-202ENST00000416371 468 ntBASIC19.73■□□□□ 0.75
PDE1AP54750 KRT18P32-201ENST00000424695 1287 ntBASIC19.73■□□□□ 0.75
PDE1AP54750 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.73■□□□□ 0.75
PDE1AP54750 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.73■□□□□ 0.75
PDE1AP54750 AC211476.1-201ENST00000503899 468 ntBASIC19.73■□□□□ 0.75
PDE1AP54750 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
PDE1AP54750 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.73■□□□□ 0.75
PDE1AP54750 ALG1L8P-201ENST00000533887 760 ntBASIC19.73■□□□□ 0.75
PDE1AP54750 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE1AP54750 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE1AP54750 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE1AP54750 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDE1AP54750 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDE1AP54750 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE1AP54750 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PDE1AP54750 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE1AP54750 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE1AP54750 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE1AP54750 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 AC243562.2-201ENST00000561247 970 ntBASIC19.72■□□□□ 0.75
PDE1AP54750 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.72■□□□□ 0.75
PDE1AP54750 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 AC004835.2-201ENST00000603762 682 ntBASIC19.72■□□□□ 0.75
PDE1AP54750 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.72■□□□□ 0.75
PDE1AP54750 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE1AP54750 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.72■□□□□ 0.75
PDE1AP54750 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE1AP54750 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.72■□□□□ 0.75
PDE1AP54750 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDE1AP54750 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.71■□□□□ 0.75
PDE1AP54750 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PDE1AP54750 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDE1AP54750 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PDE1AP54750 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDE1AP54750 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDE1AP54750 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PDE1AP54750 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.71■□□□□ 0.75
PDE1AP54750 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.71■□□□□ 0.75
PDE1AP54750 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms