Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PMS1P54277 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.82■□□□□ 0.44
PMS1P54277 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PMS1P54277 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.82■□□□□ 0.44
PMS1P54277 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PMS1P54277 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PMS1P54277 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PMS1P54277 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PMS1P54277 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PMS1P54277 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.81■□□□□ 0.44
PMS1P54277 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.81■□□□□ 0.44
PMS1P54277 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.81■□□□□ 0.44
PMS1P54277 TFAMP1-201ENST00000412727 736 ntBASIC17.81■□□□□ 0.44
PMS1P54277 AC142381.1-201ENST00000426099 345 ntBASIC17.81■□□□□ 0.44
PMS1P54277 AL671277.1-201ENST00000429656 993 ntBASIC17.81■□□□□ 0.44
PMS1P54277 FAM58CP-201ENST00000435741 640 ntBASIC17.81■□□□□ 0.44
PMS1P54277 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.81■□□□□ 0.44
PMS1P54277 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.81■□□□□ 0.44
PMS1P54277 AC243562.1-201ENST00000560672 389 ntBASIC17.81■□□□□ 0.44
PMS1P54277 AC061975.2-201ENST00000581722 295 ntBASIC17.81■□□□□ 0.44
PMS1P54277 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.81■□□□□ 0.44
PMS1P54277 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.81■□□□□ 0.44
PMS1P54277 AC136621.1-201ENST00000624017 2304 ntBASIC17.81■□□□□ 0.44
PMS1P54277 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
PMS1P54277 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PMS1P54277 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.81■□□□□ 0.44
PMS1P54277 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 AC011477.6-201ENST00000604980 1927 ntBASIC17.8■□□□□ 0.44
PMS1P54277 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PMS1P54277 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 MIR574-201ENST00000385209 96 ntBASIC17.8■□□□□ 0.44
PMS1P54277 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 POLD2P1-201ENST00000511220 997 ntBASIC17.8■□□□□ 0.44
PMS1P54277 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 AL671883.3-201ENST00000603274 991 ntBASIC17.8■□□□□ 0.44
PMS1P54277 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 AC018892.3-201ENST00000623986 2499 ntBASIC17.8■□□□□ 0.44
PMS1P54277 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.8■□□□□ 0.44
PMS1P54277 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.8■□□□□ 0.44
PMS1P54277 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PMS1P54277 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.8■□□□□ 0.44
PMS1P54277 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PMS1P54277 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PMS1P54277 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms