Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.78■□□□□ 0.28
SCNN1AP37088 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.78■□□□□ 0.28
SCNN1AP37088 HLA-V-204ENST00000476601 1289 ntBASIC16.78■□□□□ 0.28
SCNN1AP37088 AC004449.1-201ENST00000564240 433 ntBASIC16.78■□□□□ 0.28
SCNN1AP37088 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.78■□□□□ 0.28
SCNN1AP37088 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.78■□□□□ 0.28
SCNN1AP37088 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.78■□□□□ 0.28
SCNN1AP37088 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCNN1AP37088 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.78■□□□□ 0.28
SCNN1AP37088 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCNN1AP37088 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCNN1AP37088 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SCNN1AP37088 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 TUBB3P1-201ENST00000405796 1332 ntBASIC16.77■□□□□ 0.28
SCNN1AP37088 KRT18P28-201ENST00000453838 1332 ntBASIC16.77■□□□□ 0.28
SCNN1AP37088 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.77■□□□□ 0.28
SCNN1AP37088 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.77■□□□□ 0.28
SCNN1AP37088 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.77■□□□□ 0.28
SCNN1AP37088 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.77■□□□□ 0.28
SCNN1AP37088 PHKG1P2-201ENST00000457537 863 ntBASIC16.77■□□□□ 0.28
SCNN1AP37088 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.77■□□□□ 0.28
SCNN1AP37088 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.77■□□□□ 0.28
SCNN1AP37088 AL079307.3-201ENST00000556114 283 ntBASIC16.77■□□□□ 0.28
SCNN1AP37088 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.77■□□□□ 0.28
SCNN1AP37088 AL450472.2-201ENST00000603663 1156 ntBASIC16.77■□□□□ 0.28
SCNN1AP37088 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SCNN1AP37088 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.77■□□□□ 0.28
SCNN1AP37088 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCNN1AP37088 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SCNN1AP37088 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.77■□□□□ 0.27
SCNN1AP37088 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.77■□□□□ 0.27
SCNN1AP37088 CETN4P-206ENST00000642099 2168 ntBASIC16.77■□□□□ 0.27
SCNN1AP37088 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCNN1AP37088 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SCNN1AP37088 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SCNN1AP37088 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SCNN1AP37088 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.76■□□□□ 0.27
SCNN1AP37088 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.76■□□□□ 0.27
SCNN1AP37088 AL080243.2-201ENST00000418783 582 ntBASIC16.76■□□□□ 0.27
SCNN1AP37088 HIST3H2BA-201ENST00000436555 524 ntBASIC16.76■□□□□ 0.27
SCNN1AP37088 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SCNN1AP37088 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.76■□□□□ 0.27
SCNN1AP37088 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.76■□□□□ 0.27
SCNN1AP37088 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.76■□□□□ 0.27
SCNN1AP37088 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.76■□□□□ 0.27
SCNN1AP37088 AC140878.1-201ENST00000565277 250 ntBASIC16.76■□□□□ 0.27
SCNN1AP37088 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.76■□□□□ 0.27
SCNN1AP37088 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.76■□□□□ 0.27
SCNN1AP37088 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.76■□□□□ 0.27
SCNN1AP37088 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.76■□□□□ 0.27
SCNN1AP37088 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SCNN1AP37088 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
SCNN1AP37088 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
SCNN1AP37088 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCNN1AP37088 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SCNN1AP37088 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SCNN1AP37088 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms