Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC022188.1-201ENST00000620960 1664 ntBASIC17.1■□□□□ 0.33
RFC1P35251 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RFC1P35251 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.1■□□□□ 0.33
RFC1P35251 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 ACTG1P14-201ENST00000446382 1122 ntBASIC17.1■□□□□ 0.33
RFC1P35251 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.1■□□□□ 0.33
RFC1P35251 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.1■□□□□ 0.33
RFC1P35251 LINC02447-202ENST00000501888 2146 ntBASIC17.1■□□□□ 0.33
RFC1P35251 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.1■□□□□ 0.33
RFC1P35251 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.1■□□□□ 0.33
RFC1P35251 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 AC008267.7-201ENST00000624570 1194 ntBASIC17.1■□□□□ 0.33
RFC1P35251 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC1P35251 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFC1P35251 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 AC112504.1-201ENST00000623415 1841 ntBASIC17.1■□□□□ 0.33
RFC1P35251 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC1P35251 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RFC1P35251 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 MIR648-201ENST00000385046 94 ntBASIC17.09■□□□□ 0.33
RFC1P35251 SPCS2P4-201ENST00000436160 681 ntBASIC17.09■□□□□ 0.33
RFC1P35251 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.09■□□□□ 0.33
RFC1P35251 AC079140.1-201ENST00000508039 487 ntBASIC17.09■□□□□ 0.33
RFC1P35251 AC105233.2-201ENST00000523697 349 ntBASIC17.09■□□□□ 0.33
RFC1P35251 AF228730.5-201ENST00000530288 346 ntBASIC17.09■□□□□ 0.33
RFC1P35251 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 LINC01225-203ENST00000563550 1244 ntBASIC17.09■□□□□ 0.33
RFC1P35251 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.09■□□□□ 0.33
RFC1P35251 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.09■□□□□ 0.33
RFC1P35251 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RFC1P35251 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFC1P35251 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.09■□□□□ 0.33
RFC1P35251 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.09■□□□□ 0.33
RFC1P35251 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 AC069224.1-201ENST00000566372 1715 ntBASIC17.09■□□□□ 0.33
RFC1P35251 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RFC1P35251 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC1P35251 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RFC1P35251 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms