Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CD40LGP29965 AL512652.2-201ENST00000625156 1716 ntBASIC14.44□□□□□ -0.1
CD40LGP29965 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 REXO1L2P-201ENST00000425429 2069 ntBASIC14.43□□□□□ -0.1
CD40LGP29965 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.43□□□□□ -0.1
CD40LGP29965 AC073508.3-201ENST00000619697 1419 ntBASIC14.43□□□□□ -0.1
CD40LGP29965 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.43□□□□□ -0.1
CD40LGP29965 FAM210CP-201ENST00000445714 574 ntBASIC14.43□□□□□ -0.1
CD40LGP29965 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.43□□□□□ -0.1
CD40LGP29965 AC004263.2-201ENST00000617183 678 ntBASIC14.43□□□□□ -0.1
CD40LGP29965 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CD40LGP29965 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CD40LGP29965 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD40LGP29965 AL049757.1-201ENST00000616842 1596 ntBASIC14.43□□□□□ -0.1
CD40LGP29965 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CD40LGP29965 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CD40LGP29965 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.42□□□□□ -0.1
CD40LGP29965 GCSHP2-201ENST00000560971 527 ntBASIC14.42□□□□□ -0.1
CD40LGP29965 AL049597.2-201ENST00000565575 961 ntBASIC14.42□□□□□ -0.1
CD40LGP29965 RN7SL850P-201ENST00000579959 291 ntBASIC14.42□□□□□ -0.1
CD40LGP29965 AC011558.1-201ENST00000623459 338 ntBASIC14.42□□□□□ -0.1
CD40LGP29965 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD40LGP29965 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms