Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN6P29350 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN6P29350 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN6P29350 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN6P29350 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PTPN6P29350 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PTPN6P29350 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTPN6P29350 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN6P29350 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN6P29350 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN6P29350 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN6P29350 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.39■□□□□ 0.05
PTPN6P29350 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN6P29350 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN6P29350 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN6P29350 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN6P29350 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN6P29350 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 GPX1P2-201ENST00000429271 606 ntBASIC15.39■□□□□ 0.05
PTPN6P29350 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN6P29350 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN6P29350 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN6P29350 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 AC010327.4-202ENST00000591484 748 ntBASIC15.39■□□□□ 0.05
PTPN6P29350 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN6P29350 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN6P29350 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
PTPN6P29350 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PTPN6P29350 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PTPN6P29350 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN6P29350 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PTPN6P29350 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN6P29350 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.38■□□□□ 0.05
PTPN6P29350 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PTPN6P29350 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN6P29350 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.38■□□□□ 0.05
PTPN6P29350 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTPN6P29350 RPSAP43-201ENST00000402237 625 ntBASIC15.38■□□□□ 0.05
PTPN6P29350 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 UPF3AP3-201ENST00000420996 769 ntBASIC15.38■□□□□ 0.05
PTPN6P29350 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN6P29350 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PTPN6P29350 AC074386.1-202ENST00000463561 864 ntBASIC15.38■□□□□ 0.05
PTPN6P29350 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN6P29350 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN6P29350 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN6P29350 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.38■□□□□ 0.05
PTPN6P29350 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTPN6P29350 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.38■□□□□ 0.05
PTPN6P29350 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PTPN6P29350 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTPN6P29350 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 SSR4P1-203ENST00000599569 2260 ntBASIC15.37■□□□□ 0.05
PTPN6P29350 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms