Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
CTLA4P16410 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.4□□□□□ -0.1
CTLA4P16410 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CTLA4P16410 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTLA4P16410 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CTLA4P16410 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.39□□□□□ -0.11
CTLA4P16410 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.39□□□□□ -0.11
CTLA4P16410 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.39□□□□□ -0.11
CTLA4P16410 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 AC023274.1-201ENST00000418278 595 ntBASIC14.39□□□□□ -0.11
CTLA4P16410 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.39□□□□□ -0.11
CTLA4P16410 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.39□□□□□ -0.11
CTLA4P16410 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CTLA4P16410 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.39□□□□□ -0.11
CTLA4P16410 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 AC091812.2-201ENST00000619081 385 ntBASIC14.39□□□□□ -0.11
CTLA4P16410 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.39□□□□□ -0.11
CTLA4P16410 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.39□□□□□ -0.11
CTLA4P16410 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CTLA4P16410 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.39□□□□□ -0.11
CTLA4P16410 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 LINC00554-201ENST00000564841 3011 ntBASIC14.39□□□□□ -0.11
CTLA4P16410 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTLA4P16410 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CTLA4P16410 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.38□□□□□ -0.11
CTLA4P16410 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CTLA4P16410 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.38□□□□□ -0.11
CTLA4P16410 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CTLA4P16410 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CTLA4P16410 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 AL355306.1-201ENST00000415580 579 ntBASIC14.38□□□□□ -0.11
CTLA4P16410 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.38□□□□□ -0.11
CTLA4P16410 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.38□□□□□ -0.11
CTLA4P16410 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 AC073389.1-201ENST00000595595 795 ntBASIC14.38□□□□□ -0.11
CTLA4P16410 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.38□□□□□ -0.11
CTLA4P16410 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.38□□□□□ -0.11
CTLA4P16410 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CTLA4P16410 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.38□□□□□ -0.11
CTLA4P16410 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.38□□□□□ -0.11
CTLA4P16410 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.38□□□□□ -0.11
CTLA4P16410 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms