Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.68□□□□□ -0.38
CD28P10747 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.68□□□□□ -0.38
CD28P10747 RN7SL692P-201ENST00000464677 288 ntBASIC12.68□□□□□ -0.38
CD28P10747 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 AC135586.1-201ENST00000539323 574 ntBASIC12.68□□□□□ -0.38
CD28P10747 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.68□□□□□ -0.38
CD28P10747 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CD28P10747 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.68□□□□□ -0.38
CD28P10747 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.68□□□□□ -0.38
CD28P10747 AC004840.1-201ENST00000636359 365 ntBASIC12.68□□□□□ -0.38
CD28P10747 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 AL603756.1-201ENST00000606511 2163 ntBASIC12.68□□□□□ -0.38
CD28P10747 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.68□□□□□ -0.38
CD28P10747 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.68□□□□□ -0.38
CD28P10747 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD28P10747 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.67□□□□□ -0.38
CD28P10747 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CD28P10747 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 GK-202ENST00000378941 458 ntTSL 3 BASIC12.67□□□□□ -0.38
CD28P10747 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CD28P10747 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.67□□□□□ -0.38
CD28P10747 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 RN7SL618P-201ENST00000477850 296 ntBASIC12.67□□□□□ -0.38
CD28P10747 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.67□□□□□ -0.38
CD28P10747 AL596325.1-201ENST00000563991 1082 ntBASIC12.67□□□□□ -0.38
CD28P10747 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.67□□□□□ -0.38
CD28P10747 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.67□□□□□ -0.38
CD28P10747 AL132655.2-201ENST00000596276 594 ntBASIC12.67□□□□□ -0.38
CD28P10747 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.67□□□□□ -0.38
CD28P10747 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.67□□□□□ -0.38
CD28P10747 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.67□□□□□ -0.38
CD28P10747 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.67□□□□□ -0.38
CD28P10747 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 AP001094.4-201ENST00000579008 2176 ntBASIC12.67□□□□□ -0.38
CD28P10747 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.67□□□□□ -0.38
CD28P10747 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD28P10747 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD28P10747 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CD28P10747 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD28P10747 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms