Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC004840.1-201ENST00000636359 365 ntBASIC15.22■□□□□ 0.03
PDGFAP04085 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.22■□□□□ 0.03
PDGFAP04085 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.22■□□□□ 0.03
PDGFAP04085 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PDGFAP04085 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.22■□□□□ 0.03
PDGFAP04085 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PDGFAP04085 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFAP04085 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PDGFAP04085 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 KRT8P49-201ENST00000604166 1432 ntBASIC15.21■□□□□ 0.03
PDGFAP04085 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PDGFAP04085 RPL37AP1-201ENST00000412502 279 ntBASIC15.21■□□□□ 0.03
PDGFAP04085 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.21■□□□□ 0.03
PDGFAP04085 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.21■□□□□ 0.03
PDGFAP04085 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 API5-211ENST00000534695 560 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.21■□□□□ 0.03
PDGFAP04085 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PDGFAP04085 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
PDGFAP04085 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PDGFAP04085 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.21■□□□□ 0.03
PDGFAP04085 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PDGFAP04085 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PDGFAP04085 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.21■□□□□ 0.03
PDGFAP04085 FRMD8P1-201ENST00000440433 1524 ntBASIC15.21■□□□□ 0.03
PDGFAP04085 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PDGFAP04085 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDGFAP04085 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
PDGFAP04085 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDGFAP04085 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
PDGFAP04085 AC007541.1-201ENST00000570282 1469 ntBASIC15.2■□□□□ 0.02
PDGFAP04085 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFAP04085 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PDGFAP04085 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFAP04085 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFAP04085 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 HLA-H-201ENST00000383620 1096 ntBASIC15.2■□□□□ 0.02
PDGFAP04085 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.2■□□□□ 0.02
PDGFAP04085 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 MTND6P24-201ENST00000440466 518 ntBASIC15.2■□□□□ 0.02
PDGFAP04085 PRYP6-201ENST00000514804 343 ntBASIC15.2■□□□□ 0.02
PDGFAP04085 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.2■□□□□ 0.02
PDGFAP04085 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.2■□□□□ 0.02
PDGFAP04085 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PDGFAP04085 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFAP04085 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDGFAP04085 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.2■□□□□ 0.02
PDGFAP04085 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDGFAP04085 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
PDGFAP04085 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PDGFAP04085 AC087499.5-201ENST00000452760 1342 ntBASIC15.19■□□□□ 0.02
PDGFAP04085 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 AC026691.1-201ENST00000602502 2017 ntBASIC15.19■□□□□ 0.02
PDGFAP04085 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDGFAP04085 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms