Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 AC007950.2-201ENST00000615045 2347 ntBASIC14.42□□□□□ -0.1
APOC1P02654 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
APOC1P02654 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
APOC1P02654 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.41□□□□□ -0.1
APOC1P02654 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
APOC1P02654 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 AC098831.1-202ENST00000438821 336 ntBASIC14.41□□□□□ -0.1
APOC1P02654 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 UNC93B6-202ENST00000528242 690 ntBASIC14.41□□□□□ -0.1
APOC1P02654 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 AC148477.8-201ENST00000624298 468 ntBASIC14.41□□□□□ -0.1
APOC1P02654 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOC1P02654 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC1P02654 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
APOC1P02654 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC1P02654 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.4□□□□□ -0.1
APOC1P02654 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 HMGA1P7-201ENST00000406908 502 ntBASIC14.4□□□□□ -0.1
APOC1P02654 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
APOC1P02654 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 TPM4P1-201ENST00000436100 807 ntBASIC14.4□□□□□ -0.1
APOC1P02654 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.4□□□□□ -0.1
APOC1P02654 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.4□□□□□ -0.1
APOC1P02654 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
APOC1P02654 KRT126P-201ENST00000549467 1181 ntBASIC14.4□□□□□ -0.1
APOC1P02654 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.4□□□□□ -0.1
APOC1P02654 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms