Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC107890.1-201ENST00000422478 521 ntBASIC16.66■□□□□ 0.26
TOP3BO95985 NME2P1-201ENST00000426182 414 ntBASIC16.66■□□□□ 0.26
TOP3BO95985 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.66■□□□□ 0.26
TOP3BO95985 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP3BO95985 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.66■□□□□ 0.26
TOP3BO95985 AC069335.1-201ENST00000489972 472 ntBASIC16.66■□□□□ 0.26
TOP3BO95985 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.66■□□□□ 0.26
TOP3BO95985 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP3BO95985 AC112191.1-201ENST00000523689 701 ntBASIC16.66■□□□□ 0.26
TOP3BO95985 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.66■□□□□ 0.26
TOP3BO95985 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP3BO95985 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.66■□□□□ 0.26
TOP3BO95985 GGT4P-201ENST00000623672 1708 ntBASIC16.66■□□□□ 0.26
TOP3BO95985 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TOP3BO95985 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP3BO95985 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TOP3BO95985 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP3BO95985 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP3BO95985 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP3BO95985 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP3BO95985 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.66■□□□□ 0.26
TOP3BO95985 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TOP3BO95985 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP3BO95985 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP3BO95985 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP3BO95985 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP3BO95985 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 AL031731.1-201ENST00000642131 2094 ntBASIC16.65■□□□□ 0.26
TOP3BO95985 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 AL671277.1-201ENST00000429656 993 ntBASIC16.65■□□□□ 0.26
TOP3BO95985 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP3BO95985 AL592309.1-201ENST00000443127 649 ntBASIC16.65■□□□□ 0.26
TOP3BO95985 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP3BO95985 AC125807.1-201ENST00000483097 614 ntBASIC16.65■□□□□ 0.26
TOP3BO95985 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.65■□□□□ 0.26
TOP3BO95985 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP3BO95985 CR383656.12-201ENST00000549567 513 ntBASIC16.65■□□□□ 0.26
TOP3BO95985 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.65■□□□□ 0.26
TOP3BO95985 AL596325.1-201ENST00000563991 1082 ntBASIC16.65■□□□□ 0.26
TOP3BO95985 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.65■□□□□ 0.26
TOP3BO95985 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.65■□□□□ 0.26
TOP3BO95985 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 AC025048.6-201ENST00000634326 1161 ntBASIC16.65■□□□□ 0.26
TOP3BO95985 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TOP3BO95985 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TOP3BO95985 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP3BO95985 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TOP3BO95985 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TOP3BO95985 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
TOP3BO95985 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.64■□□□□ 0.25
TOP3BO95985 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP3BO95985 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.64■□□□□ 0.25
TOP3BO95985 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TOP3BO95985 AL355306.1-201ENST00000415580 579 ntBASIC16.64■□□□□ 0.25
TOP3BO95985 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.64■□□□□ 0.25
TOP3BO95985 ATP5G2P4-201ENST00000442175 420 ntBASIC16.64■□□□□ 0.25
TOP3BO95985 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TOP3BO95985 AL606495.2-201ENST00000605867 535 ntBASIC16.64■□□□□ 0.25
TOP3BO95985 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TOP3BO95985 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TOP3BO95985 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TOP3BO95985 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP3BO95985 AL603832.2-201ENST00000566195 2125 ntBASIC16.64■□□□□ 0.25
TOP3BO95985 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 PI4KAP1-204ENST00000612579 1703 ntBASIC16.64■□□□□ 0.25
TOP3BO95985 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP3BO95985 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP3BO95985 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.64■□□□□ 0.25
TOP3BO95985 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms