Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.12■□□□□ 0.33
DCXO43602 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DCXO43602 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
DCXO43602 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 ANKRD19P-201ENST00000338192 862 ntBASIC17.12■□□□□ 0.33
DCXO43602 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.12■□□□□ 0.33
DCXO43602 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DCXO43602 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.12■□□□□ 0.33
DCXO43602 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DCXO43602 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.12■□□□□ 0.33
DCXO43602 AL583810.1-201ENST00000553344 1045 ntBASIC17.12■□□□□ 0.33
DCXO43602 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DCXO43602 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.12■□□□□ 0.33
DCXO43602 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.12■□□□□ 0.33
DCXO43602 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
DCXO43602 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DCXO43602 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.12■□□□□ 0.33
DCXO43602 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DCXO43602 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.12■□□□□ 0.33
DCXO43602 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.11■□□□□ 0.33
DCXO43602 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
DCXO43602 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.11■□□□□ 0.33
DCXO43602 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
DCXO43602 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DCXO43602 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
DCXO43602 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.11■□□□□ 0.33
DCXO43602 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.11■□□□□ 0.33
DCXO43602 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 CROCCP4-201ENST00000457096 498 ntBASIC17.11■□□□□ 0.33
DCXO43602 RN7SL618P-201ENST00000477850 296 ntBASIC17.11■□□□□ 0.33
DCXO43602 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.11■□□□□ 0.33
DCXO43602 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DCXO43602 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
DCXO43602 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.11■□□□□ 0.33
DCXO43602 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 AC008735.3-201ENST00000596646 500 ntBASIC17.11■□□□□ 0.33
DCXO43602 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.11■□□□□ 0.33
DCXO43602 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.11■□□□□ 0.33
DCXO43602 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.11■□□□□ 0.33
DCXO43602 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.11■□□□□ 0.33
DCXO43602 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.11■□□□□ 0.33
DCXO43602 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DCXO43602 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCXO43602 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCXO43602 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCXO43602 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCXO43602 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCXO43602 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DCXO43602 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DCXO43602 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.1■□□□□ 0.33
DCXO43602 MEP1AP4-201ENST00000423244 1087 ntBASIC17.1■□□□□ 0.33
DCXO43602 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DCXO43602 KRT43P-201ENST00000434019 910 ntBASIC17.1■□□□□ 0.33
DCXO43602 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.1■□□□□ 0.33
DCXO43602 ELK1P1-201ENST00000485699 580 ntBASIC17.1■□□□□ 0.33
DCXO43602 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.1■□□□□ 0.33
DCXO43602 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.1■□□□□ 0.33
DCXO43602 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.1■□□□□ 0.33
DCXO43602 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.1■□□□□ 0.33
DCXO43602 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.1■□□□□ 0.33
DCXO43602 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.1■□□□□ 0.33
DCXO43602 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.1■□□□□ 0.33
DCXO43602 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.1■□□□□ 0.33
DCXO43602 CTBP2P3-201ENST00000585629 1255 ntBASIC17.1■□□□□ 0.33
DCXO43602 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.1■□□□□ 0.33
DCXO43602 AC015936.2-201ENST00000593177 259 ntBASIC17.1■□□□□ 0.33
DCXO43602 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.1■□□□□ 0.33
DCXO43602 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.1■□□□□ 0.33
DCXO43602 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DCXO43602 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms