Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRCOL1A6NCL2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AC080080.1-201ENST00000625121 2420 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SPDYE14P-201ENST00000442619 822 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 CNN2P2-201ENST00000443536 909 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 FAM86GP-201ENST00000448322 971 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 CNN2P3-201ENST00000450201 906 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AC067863.1-201ENST00000494933 530 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AC105233.2-201ENST00000523697 349 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AF228730.5-201ENST00000530288 346 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AC093512.1-201ENST00000617969 520 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AL136317.3-201ENST00000618497 906 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 AP001094.4-201ENST00000579008 2176 ntBASIC10.92□□□□□ -0.66
LRCOL1A6NCL2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LRCOL1A6NCL2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms