Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.26■■■□□ 2.43
RTCBQ9Y3I0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RTCBQ9Y3I0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
RTCBQ9Y3I0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RTCBQ9Y3I0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.25■■■□□ 2.43
RTCBQ9Y3I0 PBX2P1-201ENST00000493219 1291 ntBASIC30.25■■■□□ 2.43
RTCBQ9Y3I0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
RTCBQ9Y3I0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.24■■■□□ 2.43
RTCBQ9Y3I0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RTCBQ9Y3I0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.24■■■□□ 2.43
RTCBQ9Y3I0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RTCBQ9Y3I0 RARRES2P6-201ENST00000567333 442 ntBASIC30.23■■■□□ 2.43
RTCBQ9Y3I0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC30.23■■■□□ 2.43
RTCBQ9Y3I0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.23■■■□□ 2.43
RTCBQ9Y3I0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
RTCBQ9Y3I0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
RTCBQ9Y3I0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
RTCBQ9Y3I0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.22■■■□□ 2.43
RTCBQ9Y3I0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RTCBQ9Y3I0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC30.22■■■□□ 2.43
RTCBQ9Y3I0 AC142381.2-201ENST00000566120 298 ntBASIC30.21■■■□□ 2.43
RTCBQ9Y3I0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RTCBQ9Y3I0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RTCBQ9Y3I0 AC139426.1-201ENST00000568218 2529 ntBASIC30.21■■■□□ 2.43
RTCBQ9Y3I0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RTCBQ9Y3I0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RTCBQ9Y3I0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.2■■■□□ 2.43
RTCBQ9Y3I0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.2■■■□□ 2.43
RTCBQ9Y3I0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
RTCBQ9Y3I0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
RTCBQ9Y3I0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.2■■■□□ 2.42
RTCBQ9Y3I0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.19■■■□□ 2.42
RTCBQ9Y3I0 AC092666.2-201ENST00000613287 246 ntBASIC30.19■■■□□ 2.42
RTCBQ9Y3I0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
RTCBQ9Y3I0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RTCBQ9Y3I0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.18■■■□□ 2.42
RTCBQ9Y3I0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC30.18■■■□□ 2.42
RTCBQ9Y3I0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTCBQ9Y3I0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RTCBQ9Y3I0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RTCBQ9Y3I0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
RTCBQ9Y3I0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
RTCBQ9Y3I0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RTCBQ9Y3I0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.15■■■□□ 2.42
RTCBQ9Y3I0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RTCBQ9Y3I0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RTCBQ9Y3I0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.41
RTCBQ9Y3I0 UNC93B3-201ENST00000308076 687 ntBASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RTCBQ9Y3I0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTCBQ9Y3I0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
RTCBQ9Y3I0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 AC026271.2-201ENST00000428091 497 ntBASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 AL031432.3-201ENST00000607698 485 ntBASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RTCBQ9Y3I0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 SUDS3P1-201ENST00000505831 966 ntBASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 SNX5-217ENST00000606557 1087 ntBASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 MIR6722-201ENST00000617286 78 ntBASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
RTCBQ9Y3I0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RTCBQ9Y3I0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
RTCBQ9Y3I0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
RTCBQ9Y3I0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.09■■■□□ 2.41
RTCBQ9Y3I0 AL136162.1-201ENST00000607711 1078 ntBASIC30.09■■■□□ 2.41
RTCBQ9Y3I0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.09■■■□□ 2.41
RTCBQ9Y3I0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.08■■■□□ 2.41
RTCBQ9Y3I0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RTCBQ9Y3I0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms