Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3Q9UBI1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3Q9UBI1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3Q9UBI1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COMMD3Q9UBI1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3Q9UBI1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
COMMD3Q9UBI1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
COMMD3Q9UBI1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.64■□□□□ 0.9
COMMD3Q9UBI1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3Q9UBI1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.64■□□□□ 0.89
COMMD3Q9UBI1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.64■□□□□ 0.89
COMMD3Q9UBI1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3Q9UBI1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3Q9UBI1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3Q9UBI1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3Q9UBI1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.61■□□□□ 0.89
COMMD3Q9UBI1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
COMMD3Q9UBI1 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.59■□□□□ 0.89
COMMD3Q9UBI1 SUZ12P1-203ENST00000578195 985 ntBASIC20.59■□□□□ 0.89
COMMD3Q9UBI1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COMMD3Q9UBI1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD3Q9UBI1 AL117328.2-201ENST00000624617 1940 ntBASIC20.59■□□□□ 0.89
COMMD3Q9UBI1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COMMD3Q9UBI1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
COMMD3Q9UBI1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD3Q9UBI1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
COMMD3Q9UBI1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.58■□□□□ 0.89
COMMD3Q9UBI1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD3Q9UBI1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.58■□□□□ 0.88
COMMD3Q9UBI1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD3Q9UBI1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.58■□□□□ 0.88
COMMD3Q9UBI1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD3Q9UBI1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD3Q9UBI1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms