Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
COMMD9Q9P000 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.91■□□□□ 0.78
COMMD9Q9P000 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COMMD9Q9P000 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD9Q9P000 DUSP8P5-201ENST00000422884 1815 ntBASIC19.9■□□□□ 0.78
COMMD9Q9P000 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD9Q9P000 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.9■□□□□ 0.78
COMMD9Q9P000 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD9Q9P000 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COMMD9Q9P000 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD9Q9P000 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD9Q9P000 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD9Q9P000 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD9Q9P000 AP003733.4-201ENST00000623785 1697 ntBASIC19.9■□□□□ 0.78
COMMD9Q9P000 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD9Q9P000 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD9Q9P000 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.89■□□□□ 0.77
COMMD9Q9P000 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD9Q9P000 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD9Q9P000 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD9Q9P000 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COMMD9Q9P000 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD9Q9P000 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.88■□□□□ 0.77
COMMD9Q9P000 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COMMD9Q9P000 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 AC096887.2-201ENST00000623443 1957 ntBASIC19.87■□□□□ 0.77
COMMD9Q9P000 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.87■□□□□ 0.77
COMMD9Q9P000 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COMMD9Q9P000 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COMMD9Q9P000 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD9Q9P000 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD9Q9P000 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD9Q9P000 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COMMD9Q9P000 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD9Q9P000 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.86■□□□□ 0.77
COMMD9Q9P000 LINC01971-201ENST00000617888 1048 ntBASIC19.86■□□□□ 0.77
COMMD9Q9P000 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.86■□□□□ 0.77
COMMD9Q9P000 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD9Q9P000 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD9Q9P000 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.86■□□□□ 0.77
COMMD9Q9P000 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COMMD9Q9P000 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COMMD9Q9P000 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COMMD9Q9P000 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COMMD9Q9P000 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COMMD9Q9P000 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
COMMD9Q9P000 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD9Q9P000 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COMMD9Q9P000 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COMMD9Q9P000 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COMMD9Q9P000 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD9Q9P000 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD9Q9P000 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COMMD9Q9P000 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD9Q9P000 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD9Q9P000 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD9Q9P000 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD9Q9P000 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD9Q9P000 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COMMD9Q9P000 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD9Q9P000 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.82■□□□□ 0.76
COMMD9Q9P000 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD9Q9P000 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD9Q9P000 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.82■□□□□ 0.76
COMMD9Q9P000 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD9Q9P000 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COMMD9Q9P000 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.82■□□□□ 0.76
COMMD9Q9P000 AC008813.1-201ENST00000536597 885 ntBASIC19.82■□□□□ 0.76
COMMD9Q9P000 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.82■□□□□ 0.76
COMMD9Q9P000 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD9Q9P000 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms