Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PARPBPQ9NWS1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 AC022616.5-201ENST00000518796 181 ntBASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 AC010980.1-201ENST00000587192 1142 ntBASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PARPBPQ9NWS1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PARPBPQ9NWS1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PARPBPQ9NWS1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 AL592295.1-201ENST00000400984 884 ntBASIC21■□□□□ 0.95
PARPBPQ9NWS1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 YBX1P4-201ENST00000392794 808 ntBASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 FOXO3B-201ENST00000395675 1928 ntBASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 MIR4508-201ENST00000584178 70 ntBASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms