Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB16Q9NRJ7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHB16Q9NRJ7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PCDHB16Q9NRJ7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB16Q9NRJ7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB16Q9NRJ7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHB16Q9NRJ7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHB16Q9NRJ7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHB16Q9NRJ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHB16Q9NRJ7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHB16Q9NRJ7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 AC025884.2-201ENST00000553429 711 ntBASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHB16Q9NRJ7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 AL139125.2-201ENST00000623134 1869 ntBASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB16Q9NRJ7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 SMPD5-203ENST00000639008 1464 ntBASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB16Q9NRJ7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB16Q9NRJ7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 AC060814.1-201ENST00000554326 538 ntBASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB16Q9NRJ7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB16Q9NRJ7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms