Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRTM1Q9HBL6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.66■■□□□ 1.22
LRTM1Q9HBL6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRTM1Q9HBL6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 RAP2CP1-202ENST00000605179 643 ntBASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRTM1Q9HBL6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LRTM1Q9HBL6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.64■■□□□ 1.21
LRTM1Q9HBL6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRTM1Q9HBL6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
LRTM1Q9HBL6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRTM1Q9HBL6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.64■■□□□ 1.21
LRTM1Q9HBL6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRTM1Q9HBL6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRTM1Q9HBL6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.63■■□□□ 1.21
LRTM1Q9HBL6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRTM1Q9HBL6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.63■■□□□ 1.21
LRTM1Q9HBL6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 AC026202.3-201ENST00000600805 1127 ntBASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 MIR6089-201ENST00000616698 64 ntBASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.62■■□□□ 1.21
LRTM1Q9HBL6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 LINC00543-201ENST00000567234 1845 ntBASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRTM1Q9HBL6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRTM1Q9HBL6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRTM1Q9HBL6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRTM1Q9HBL6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRTM1Q9HBL6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
LRTM1Q9HBL6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.58■■□□□ 1.21
LRTM1Q9HBL6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRTM1Q9HBL6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRTM1Q9HBL6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRTM1Q9HBL6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRTM1Q9HBL6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRTM1Q9HBL6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRTM1Q9HBL6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRTM1Q9HBL6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 KRT18P10-201ENST00000388836 1287 ntBASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRTM1Q9HBL6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LRTM1Q9HBL6 AC141586.4-201ENST00000624558 1573 ntBASIC22.56■■□□□ 1.2
LRTM1Q9HBL6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRTM1Q9HBL6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRTM1Q9HBL6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LRTM1Q9HBL6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRTM1Q9HBL6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRTM1Q9HBL6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRTM1Q9HBL6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.55■■□□□ 1.2
LRTM1Q9HBL6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRTM1Q9HBL6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LRTM1Q9HBL6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRTM1Q9HBL6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.54■■□□□ 1.2
LRTM1Q9HBL6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRTM1Q9HBL6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms