Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 MIR762-201ENST00000390236 83 ntBASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SEC22CQ9BRL7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 MIR6090-201ENST00000622481 60 ntBASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SEC22CQ9BRL7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 AC108673.1-201ENST00000510422 1159 ntBASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 LINC00565-201ENST00000562710 2331 ntBASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.87■□□□□ 0.77
SEC22CQ9BRL7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 EP400NL-214ENST00000641289 2402 ntBASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SEC22CQ9BRL7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SEC22CQ9BRL7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SEC22CQ9BRL7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.85■□□□□ 0.77
SEC22CQ9BRL7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC22CQ9BRL7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SEC22CQ9BRL7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.84■□□□□ 0.77
SEC22CQ9BRL7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SEC22CQ9BRL7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SEC22CQ9BRL7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
SEC22CQ9BRL7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.83■□□□□ 0.76
SEC22CQ9BRL7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.83■□□□□ 0.76
SEC22CQ9BRL7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEC22CQ9BRL7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEC22CQ9BRL7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.83■□□□□ 0.76
SEC22CQ9BRL7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SEC22CQ9BRL7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SEC22CQ9BRL7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SEC22CQ9BRL7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SEC22CQ9BRL7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.82■□□□□ 0.76
SEC22CQ9BRL7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC22CQ9BRL7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SEC22CQ9BRL7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.82■□□□□ 0.76
SEC22CQ9BRL7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SEC22CQ9BRL7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SEC22CQ9BRL7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SEC22CQ9BRL7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEC22CQ9BRL7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SEC22CQ9BRL7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.79■□□□□ 0.76
SEC22CQ9BRL7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.79■□□□□ 0.76
SEC22CQ9BRL7 AC233723.2-201ENST00000623798 2106 ntBASIC19.79■□□□□ 0.76
SEC22CQ9BRL7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SEC22CQ9BRL7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SEC22CQ9BRL7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms