Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
COL21A1Q96P44 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL21A1Q96P44 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.18■■□□□ 1.14
COL21A1Q96P44 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.18■■□□□ 1.14
COL21A1Q96P44 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
COL21A1Q96P44 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL21A1Q96P44 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL21A1Q96P44 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
COL21A1Q96P44 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL21A1Q96P44 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL21A1Q96P44 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.16■■□□□ 1.14
COL21A1Q96P44 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.16■■□□□ 1.14
COL21A1Q96P44 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL21A1Q96P44 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL21A1Q96P44 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
COL21A1Q96P44 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
COL21A1Q96P44 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL21A1Q96P44 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
COL21A1Q96P44 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.16■■□□□ 1.14
COL21A1Q96P44 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL21A1Q96P44 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL21A1Q96P44 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 AC129492.7-201ENST00000622992 756 ntBASIC22.15■■□□□ 1.14
COL21A1Q96P44 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL21A1Q96P44 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL21A1Q96P44 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
COL21A1Q96P44 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL21A1Q96P44 AC018755.3-202ENST00000596210 929 ntBASIC22.14■■□□□ 1.13
COL21A1Q96P44 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
COL21A1Q96P44 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL21A1Q96P44 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
COL21A1Q96P44 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL21A1Q96P44 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL21A1Q96P44 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL21A1Q96P44 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL21A1Q96P44 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
COL21A1Q96P44 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
COL21A1Q96P44 DUX4L9-201ENST00000449051 1259 ntBASIC22.13■■□□□ 1.13
COL21A1Q96P44 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.13■■□□□ 1.13
COL21A1Q96P44 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
COL21A1Q96P44 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL21A1Q96P44 AL139125.2-201ENST00000623134 1869 ntBASIC22.13■■□□□ 1.13
COL21A1Q96P44 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL21A1Q96P44 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.12■■□□□ 1.13
COL21A1Q96P44 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL21A1Q96P44 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL21A1Q96P44 SPCS2P3-201ENST00000500401 656 ntBASIC22.12■■□□□ 1.13
COL21A1Q96P44 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
COL21A1Q96P44 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL21A1Q96P44 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL21A1Q96P44 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.11■■□□□ 1.13
COL21A1Q96P44 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL21A1Q96P44 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL21A1Q96P44 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL21A1Q96P44 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL21A1Q96P44 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
COL21A1Q96P44 SLC6A10P-202ENST00000431994 2058 ntBASIC22.1■■□□□ 1.13
COL21A1Q96P44 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL21A1Q96P44 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.1■■□□□ 1.13
COL21A1Q96P44 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
COL21A1Q96P44 MIR6765-201ENST00000614092 87 ntBASIC22.1■■□□□ 1.13
COL21A1Q96P44 AC012354.3-201ENST00000623734 483 ntBASIC22.1■■□□□ 1.13
COL21A1Q96P44 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COL21A1Q96P44 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL21A1Q96P44 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.09■■□□□ 1.13
COL21A1Q96P44 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL21A1Q96P44 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL21A1Q96P44 KRT18P10-201ENST00000388836 1287 ntBASIC22.09■■□□□ 1.13
COL21A1Q96P44 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL21A1Q96P44 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.09■■□□□ 1.13
COL21A1Q96P44 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL21A1Q96P44 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL21A1Q96P44 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.08■■□□□ 1.13
COL21A1Q96P44 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL21A1Q96P44 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL21A1Q96P44 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL21A1Q96P44 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.07■■□□□ 1.12
COL21A1Q96P44 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
COL21A1Q96P44 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL21A1Q96P44 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL21A1Q96P44 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
COL21A1Q96P44 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL21A1Q96P44 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL21A1Q96P44 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.07■■□□□ 1.12
COL21A1Q96P44 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL21A1Q96P44 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL21A1Q96P44 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL21A1Q96P44 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL21A1Q96P44 AC004987.1-201ENST00000428627 508 ntBASIC22.06■■□□□ 1.12
COL21A1Q96P44 ATP5G2P3-201ENST00000429083 425 ntBASIC22.06■■□□□ 1.12
COL21A1Q96P44 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.06■■□□□ 1.12
COL21A1Q96P44 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.06■■□□□ 1.12
COL21A1Q96P44 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.06■■□□□ 1.12
COL21A1Q96P44 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms