Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF48Q96MX3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF48Q96MX3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF48Q96MX3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF48Q96MX3 AC137630.3-201ENST00000607245 391 ntBASIC19.23■□□□□ 0.67
ZNF48Q96MX3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF48Q96MX3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF48Q96MX3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 AC145676.1-201ENST00000514988 2004 ntBASIC19.22■□□□□ 0.67
ZNF48Q96MX3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF48Q96MX3 AC019069.1-201ENST00000610008 1333 ntBASIC19.22■□□□□ 0.67
ZNF48Q96MX3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF48Q96MX3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF48Q96MX3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF48Q96MX3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF48Q96MX3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.21■□□□□ 0.67
ZNF48Q96MX3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.2■□□□□ 0.66
ZNF48Q96MX3 AC021242.3-201ENST00000607598 1377 ntBASIC19.19■□□□□ 0.66
ZNF48Q96MX3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 KRT16P3-201ENST00000439127 1283 ntBASIC19.19■□□□□ 0.66
ZNF48Q96MX3 TSPY9P-201ENST00000440215 945 ntBASIC19.19■□□□□ 0.66
ZNF48Q96MX3 TSPY11P-201ENST00000442607 1045 ntBASIC19.19■□□□□ 0.66
ZNF48Q96MX3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZNF48Q96MX3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF48Q96MX3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF48Q96MX3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF48Q96MX3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZNF48Q96MX3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF48Q96MX3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF48Q96MX3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF48Q96MX3 AC008406.3-201ENST00000620001 1374 ntBASIC19.18■□□□□ 0.66
ZNF48Q96MX3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 MIR4281-201ENST00000580852 62 ntBASIC19.17■□□□□ 0.66
ZNF48Q96MX3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF48Q96MX3 DUSP8P4-201ENST00000399538 1761 ntBASIC19.16■□□□□ 0.66
ZNF48Q96MX3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF48Q96MX3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF48Q96MX3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF48Q96MX3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF48Q96MX3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.16■□□□□ 0.66
ZNF48Q96MX3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF48Q96MX3 AC092803.2-201ENST00000564287 1899 ntBASIC19.16■□□□□ 0.66
ZNF48Q96MX3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF48Q96MX3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF48Q96MX3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ZNF48Q96MX3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.13■□□□□ 0.65
ZNF48Q96MX3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF48Q96MX3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
ZNF48Q96MX3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF48Q96MX3 AC092028.1-203ENST00000608262 953 ntBASIC19.13■□□□□ 0.65
ZNF48Q96MX3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF48Q96MX3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF48Q96MX3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF48Q96MX3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF48Q96MX3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF48Q96MX3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms