Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF170Q96K19 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF170Q96K19 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF170Q96K19 AC010501.1-201ENST00000606270 1962 ntBASIC20.79■□□□□ 0.92
RNF170Q96K19 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF170Q96K19 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF170Q96K19 AC060814.1-201ENST00000554326 538 ntBASIC20.78■□□□□ 0.92
RNF170Q96K19 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF170Q96K19 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF170Q96K19 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF170Q96K19 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF170Q96K19 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RNF170Q96K19 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF170Q96K19 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RNF170Q96K19 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF170Q96K19 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF170Q96K19 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF170Q96K19 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF170Q96K19 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RNF170Q96K19 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF170Q96K19 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF170Q96K19 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RNF170Q96K19 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF170Q96K19 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF170Q96K19 MIR4449-201ENST00000578365 66 ntBASIC20.76■□□□□ 0.91
RNF170Q96K19 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF170Q96K19 AC022413.1-201ENST00000624602 984 ntBASIC20.76■□□□□ 0.91
RNF170Q96K19 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF170Q96K19 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RNF170Q96K19 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF170Q96K19 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF170Q96K19 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF170Q96K19 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF170Q96K19 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF170Q96K19 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF170Q96K19 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF170Q96K19 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF170Q96K19 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF170Q96K19 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RNF170Q96K19 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF170Q96K19 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF170Q96K19 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF170Q96K19 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF170Q96K19 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF170Q96K19 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF170Q96K19 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RNF170Q96K19 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF170Q96K19 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF170Q96K19 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF170Q96K19 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF170Q96K19 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF170Q96K19 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF170Q96K19 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF170Q96K19 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF170Q96K19 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF170Q96K19 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF170Q96K19 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF170Q96K19 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF170Q96K19 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF170Q96K19 AL157400.5-201ENST00000507624 621 ntBASIC20.72■□□□□ 0.91
RNF170Q96K19 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF170Q96K19 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF170Q96K19 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF170Q96K19 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF170Q96K19 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF170Q96K19 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
RNF170Q96K19 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF170Q96K19 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF170Q96K19 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF170Q96K19 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF170Q96K19 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF170Q96K19 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF170Q96K19 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RNF170Q96K19 AC022211.4-201ENST00000625094 2161 ntBASIC20.7■□□□□ 0.91
RNF170Q96K19 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF170Q96K19 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF170Q96K19 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF170Q96K19 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF170Q96K19 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF170Q96K19 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.69■□□□□ 0.9
RNF170Q96K19 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF170Q96K19 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF170Q96K19 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF170Q96K19 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF170Q96K19 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF170Q96K19 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF170Q96K19 SMPD5-203ENST00000639008 1464 ntBASIC20.69■□□□□ 0.9
RNF170Q96K19 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF170Q96K19 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF170Q96K19 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF170Q96K19 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF170Q96K19 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF170Q96K19 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF170Q96K19 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF170Q96K19 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF170Q96K19 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF170Q96K19 AC092296.2-201ENST00000589470 999 ntBASIC20.68■□□□□ 0.9
RNF170Q96K19 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF170Q96K19 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF170Q96K19 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms