Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NPIPB3Q92617 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB3Q92617 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB3Q92617 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.55■□□□□ 0.56
NPIPB3Q92617 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPB3Q92617 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NPIPB3Q92617 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPB3Q92617 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB3Q92617 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPB3Q92617 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB3Q92617 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB3Q92617 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPB3Q92617 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPB3Q92617 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPB3Q92617 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPB3Q92617 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPB3Q92617 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPB3Q92617 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.53■□□□□ 0.56
NPIPB3Q92617 MIR7108-201ENST00000614319 87 ntBASIC18.53■□□□□ 0.56
NPIPB3Q92617 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.53■□□□□ 0.56
NPIPB3Q92617 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPB3Q92617 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.52■□□□□ 0.56
NPIPB3Q92617 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPB3Q92617 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPB3Q92617 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPB3Q92617 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NPIPB3Q92617 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPB3Q92617 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.52■□□□□ 0.55
NPIPB3Q92617 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NPIPB3Q92617 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.51■□□□□ 0.55
NPIPB3Q92617 LINC00543-201ENST00000567234 1845 ntBASIC18.51■□□□□ 0.55
NPIPB3Q92617 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.51■□□□□ 0.55
NPIPB3Q92617 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.51■□□□□ 0.55
NPIPB3Q92617 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.51■□□□□ 0.55
NPIPB3Q92617 AC092296.2-201ENST00000589470 999 ntBASIC18.51■□□□□ 0.55
NPIPB3Q92617 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NPIPB3Q92617 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPB3Q92617 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPB3Q92617 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPB3Q92617 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPB3Q92617 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPB3Q92617 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPB3Q92617 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.49■□□□□ 0.55
NPIPB3Q92617 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPB3Q92617 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPB3Q92617 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPB3Q92617 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.49■□□□□ 0.55
NPIPB3Q92617 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPB3Q92617 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPB3Q92617 ECEL1P2-201ENST00000461596 1295 ntBASIC18.48■□□□□ 0.55
NPIPB3Q92617 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.48■□□□□ 0.55
NPIPB3Q92617 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPB3Q92617 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPB3Q92617 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NPIPB3Q92617 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 MIR639-201ENST00000384974 98 ntBASIC18.47■□□□□ 0.55
NPIPB3Q92617 RP9P-202ENST00000450133 1212 ntBASIC18.47■□□□□ 0.55
NPIPB3Q92617 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.47■□□□□ 0.55
NPIPB3Q92617 AC022413.1-201ENST00000624602 984 ntBASIC18.47■□□□□ 0.55
NPIPB3Q92617 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.47■□□□□ 0.55
NPIPB3Q92617 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.47■□□□□ 0.55
NPIPB3Q92617 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB3Q92617 AC141586.4-201ENST00000624558 1573 ntBASIC18.47■□□□□ 0.55
NPIPB3Q92617 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB3Q92617 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB3Q92617 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NPIPB3Q92617 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB3Q92617 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB3Q92617 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
NPIPB3Q92617 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.45■□□□□ 0.54
NPIPB3Q92617 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB3Q92617 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB3Q92617 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.44■□□□□ 0.54
NPIPB3Q92617 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB3Q92617 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.44■□□□□ 0.54
NPIPB3Q92617 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB3Q92617 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.44■□□□□ 0.54
NPIPB3Q92617 AC093536.1-201ENST00000569153 554 ntBASIC18.44■□□□□ 0.54
NPIPB3Q92617 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.44■□□□□ 0.54
NPIPB3Q92617 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB3Q92617 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.44■□□□□ 0.54
NPIPB3Q92617 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB3Q92617 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms