Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.23■■■□□ 2.27
SNED1Q8TER0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SNED1Q8TER0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SNED1Q8TER0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
SNED1Q8TER0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
SNED1Q8TER0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29.22■■■□□ 2.27
SNED1Q8TER0 ZNRF2P3-201ENST00000424200 374 ntBASIC29.22■■■□□ 2.27
SNED1Q8TER0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.22■■■□□ 2.27
SNED1Q8TER0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SNED1Q8TER0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
SNED1Q8TER0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
SNED1Q8TER0 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.21■■■□□ 2.27
SNED1Q8TER0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC29.21■■■□□ 2.27
SNED1Q8TER0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
SNED1Q8TER0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
SNED1Q8TER0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
SNED1Q8TER0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
SNED1Q8TER0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.2■■■□□ 2.27
SNED1Q8TER0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
SNED1Q8TER0 RARRES2P6-201ENST00000567333 442 ntBASIC29.2■■■□□ 2.27
SNED1Q8TER0 AL031432.3-201ENST00000607698 485 ntBASIC29.2■■■□□ 2.27
SNED1Q8TER0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.2■■■□□ 2.26
SNED1Q8TER0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SNED1Q8TER0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
SNED1Q8TER0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SNED1Q8TER0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SNED1Q8TER0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.2■■■□□ 2.26
SNED1Q8TER0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.2■■■□□ 2.26
SNED1Q8TER0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
SNED1Q8TER0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SNED1Q8TER0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.19■■■□□ 2.26
SNED1Q8TER0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
SNED1Q8TER0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SNED1Q8TER0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SNED1Q8TER0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.19■■■□□ 2.26
SNED1Q8TER0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.18■■■□□ 2.26
SNED1Q8TER0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SNED1Q8TER0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.18■■■□□ 2.26
SNED1Q8TER0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.18■■■□□ 2.26
SNED1Q8TER0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
SNED1Q8TER0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SNED1Q8TER0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SNED1Q8TER0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SNED1Q8TER0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
SNED1Q8TER0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC29.17■■■□□ 2.26
SNED1Q8TER0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC29.17■■■□□ 2.26
SNED1Q8TER0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SNED1Q8TER0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SNED1Q8TER0 AC026271.2-201ENST00000428091 497 ntBASIC29.16■■■□□ 2.26
SNED1Q8TER0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
SNED1Q8TER0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SNED1Q8TER0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SNED1Q8TER0 AC106739.1-201ENST00000617035 715 ntBASIC29.16■■■□□ 2.26
SNED1Q8TER0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.15■■■□□ 2.26
SNED1Q8TER0 AK3-203ENST00000447596 705 ntTSL 2 BASIC29.14■■■□□ 2.26
SNED1Q8TER0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SNED1Q8TER0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
SNED1Q8TER0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SNED1Q8TER0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SNED1Q8TER0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.13■■■□□ 2.25
SNED1Q8TER0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SNED1Q8TER0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.13■■■□□ 2.25
SNED1Q8TER0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.13■■■□□ 2.25
SNED1Q8TER0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
SNED1Q8TER0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.12■■■□□ 2.25
SNED1Q8TER0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.12■■■□□ 2.25
SNED1Q8TER0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
SNED1Q8TER0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
SNED1Q8TER0 AC142086.6-201ENST00000621154 1765 ntBASIC29.12■■■□□ 2.25
SNED1Q8TER0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.12■■■□□ 2.25
SNED1Q8TER0 AP004609.3-201ENST00000610705 1884 ntBASIC29.11■■■□□ 2.25
SNED1Q8TER0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
SNED1Q8TER0 SUDS3P1-201ENST00000505831 966 ntBASIC29.11■■■□□ 2.25
SNED1Q8TER0 SNX5-217ENST00000606557 1087 ntBASIC29.11■■■□□ 2.25
SNED1Q8TER0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SNED1Q8TER0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.1■■■□□ 2.25
SNED1Q8TER0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.1■■■□□ 2.25
SNED1Q8TER0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.1■■■□□ 2.25
SNED1Q8TER0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
SNED1Q8TER0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SNED1Q8TER0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SNED1Q8TER0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNED1Q8TER0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNED1Q8TER0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNED1Q8TER0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SNED1Q8TER0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SNED1Q8TER0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
SNED1Q8TER0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC29.09■■■□□ 2.25
SNED1Q8TER0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
SNED1Q8TER0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.08■■■□□ 2.25
SNED1Q8TER0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SNED1Q8TER0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SNED1Q8TER0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
SNED1Q8TER0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
SNED1Q8TER0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.07■■■□□ 2.24
SNED1Q8TER0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC29.07■■■□□ 2.24
SNED1Q8TER0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.07■■■□□ 2.24
SNED1Q8TER0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SNED1Q8TER0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SNED1Q8TER0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms